EnhancerDB
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  3. rs555900194[chr5:171868509]
Enhancers that have rs555900194[chr5:171868509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555900194[chr5:171868509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171868504 171868513 HIC2 JASPAR yes 67790545
chr5 171868507 171868511 LFA1 TRANSFAC yes 67790546
Genes associated with rs555900194[chr5:171868509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More