EnhancerDB
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  3. rs555918769[chr12:96636586]
Enhancers that have rs555918769[chr12:96636586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 96636403 96636783 vista14562
VISTA
Transcript factors that have rs555918769[chr12:96636586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96636367 96636737 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053216
chr12 96636527 96636791 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053217
chr12 96636530 96636806 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053218
chr12 96636570 96636773 SPI1 UCSC Txn Factor no Conserved 108053219
chr12 96636570 96636773 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108053220
chr12 96636578 96636592 RXRB JASPAR yes 82461020
chr12 96636578 96636592 RXRB JASPAR yes 123052403
chr12 96636578 96636593 NR2C2 JASPAR yes 82461021
chr12 96636578 96636593 NR2C2 JASPAR yes 123052404
Genes associated with rs555918769[chr12:96636586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More