EnhancerDB
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  3. rs555920676[chr18:51778374]
Enhancers that have rs555920676[chr18:51778374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs555920676[chr18:51778374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51778366 51778376 TEAD1 JASPAR yes 110711675
chr18 51778366 51778376 TEAD4 JASPAR yes 110711676
chr18 51778367 51778375 TEAD3 JASPAR yes 110711677
chr18 51778368 51778389 IRF1 JASPAR yes 110711678
chr18 51778369 51778390 IRF1 JASPAR yes 110711679
chr18 51778370 51778375 ETS2 TRANSFAC yes 110711680
chr18 51778370 51778391 IRF1 JASPAR yes 110711681
chr18 51778371 51778392 IRF1 JASPAR yes 110711682
chr18 51778372 51778387 FOXP1 JASPAR yes 110711683
chr18 51778372 51778393 IRF1 JASPAR yes 110711684
chr18 51778373 51778388 FOXP1 JASPAR yes 110711685
chr18 51778373 51778394 IRF1 JASPAR yes 110711686
chr18 51778374 51778389 FOXP1 JASPAR yes 110711687
Genes associated with rs555920676[chr18:51778374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More