EnhancerDB
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  3. rs555993963[chr12:53352291]
Enhancers that have rs555993963[chr12:53352291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555993963[chr12:53352291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53351424 53352422 TCF7L2 GTRD no Colon (HCT116) 21548177
chr12 53351795 53352352 TCF7L2 GTRD no Colon (HCT116) 21548179
chr12 53351938 53352608 ZNF143 GTRD no Epithelial (MCF-7) 21548180
chr12 53352016 53353345 ZNF143 GTRD no Epithelial (MCF-7) 21548181
chr12 53352055 53353583 ZBTB33 GTRD no Lung (A549) 21548182
chr12 53352065 53353099 ZBTB33 GTRD no Lung (A549) 21548183
chr12 53352108 53353294 ZNF143 GTRD no Epithelial (MCF-7) 21548184
chr12 53352158 53353617 ZNF274 GTRD no Cervix (HeLa-S3) 21548185
chr12 53352163 53353513 ZNF274 GTRD no Cervix (HeLa-S3) 21548186
chr12 53352171 53353472 ZBTB33 GTRD no Lung (A549) 21548187
chr12 53352180 53353262 ZNF274 GTRD no Cervix (HeLa-S3) 21548188
chr12 53352227 53353754 ZNF274 GTRD no Bone Marrow (K562) 21548189
chr12 53352231 53353342 ZNF143 GTRD no Epithelial (MCF-7) 21548190
chr12 53352248 53353194 ZNF274 GTRD no Cervix (HeLa-S3) 21548191
chr12 53352284 53353181 CTCF GTRD no Spleen 21548192
Genes associated with rs555993963[chr12:53352291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More