EnhancerDB
  1. Home
  2. SNP
  3. rs556054178[chr17:79960143]
Enhancers that have rs556054178[chr17:79960143]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79955085 79966579 enh17449
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs556054178[chr17:79960143]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79960137 79960152 FOXA1 JASPAR yes 56345338
chr17 79960138 79960150 FOXI1 JASPAR yes 56345339
chr17 79960138 79960153 FOXP1 JASPAR yes 56345340
chr17 79960139 79960151 FOXC2 JASPAR yes 56345341
chr17 79960139 79960153 ONECUT2 JASPAR yes 56345342
chr17 79960139 79960153 ONECUT3 JASPAR yes 56345343
chr17 79960140 79960151 FOXB1 JASPAR yes 56345344
chr17 79960140 79960151 FOXC1 JASPAR yes 56345345
chr17 79960141 79960145 YY1 TRANSFAC yes 56345346
Genes associated with rs556054178[chr17:79960143], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More