EnhancerDB
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  3. rs556058566[chr1:201612238]
Enhancers that have rs556058566[chr1:201612238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201600540 201629395 enh12525
Brain (SK-N-SH) Large Intestine Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs556058566[chr1:201612238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201610945 201616722 ZNF274 GTRD no Bone Marrow (K562) 107856771
chr1 201610945 201616722 ZNF274 GTRD no Bone Marrow (K562) 107856772
chr1 201610945 201616722 ZNF274 GTRD no Bone Marrow (K562) 107856773
chr1 201611650 201612446 ZNF274 GTRD no Blood (GM12878) 107856777
chr1 201611667 201612326 ZNF274 GTRD no Blood (GM12878) 107856778
chr1 201612217 201612238 ZNF263 JASPAR yes 34516273
chr1 201612219 201612240 IRF1 JASPAR yes 34516276
chr1 201612221 201612242 IRF1 JASPAR yes 34516277
chr1 201612221 201612242 ZNF263 JASPAR yes 34516278
chr1 201612222 201612243 ZNF263 JASPAR yes 34516279
chr1 201612225 201612246 IRF1 JASPAR yes 34516280
chr1 201612225 201612246 ZNF263 JASPAR yes 34516281
chr1 201612226 201612247 ZNF263 JASPAR yes 34516282
chr1 201612229 201612250 IRF1 JASPAR yes 34516283
chr1 201612229 201612250 ZNF263 JASPAR yes 34516284
chr1 201612232 201612253 ZNF263 JASPAR yes 34516285
chr1 201612233 201612254 ZNF263 JASPAR yes 34516286
chr1 201612236 201612257 ZNF263 JASPAR yes 34516287
chr1 201612237 201612258 ZNF263 JASPAR yes 34516288
Genes associated with rs556058566[chr1:201612238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More