EnhancerDB
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  3. rs556060271[chr12:65926925]
Enhancers that have rs556060271[chr12:65926925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65910512 65934055 enh14789
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus
chr12 65926688 65927190 vista13816
VISTA
Transcript factors that have rs556060271[chr12:65926925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65925217 65927363 ZNF274 GTRD no Liver (HepG2) 108041980
chr12 65925333 65927027 ZNF274 GTRD no Liver (HepG2) 108041981
chr12 65925394 65927084 ZNF274 GTRD no Liver (HepG2) 108041982
chr12 65925397 65927818 ZNF274 GTRD no Liver (HepG2) 108041983
chr12 65925513 65927085 ZNF274 GTRD no Liver (HepG2) 108041984
chr12 65925561 65927566 ZNF274 GTRD no Liver (HepG2) 108041985
chr12 65925590 65927053 ZNF274 GTRD no Liver (HepG2) 108041986
chr12 65925599 65927123 ZNF274 GTRD no Liver (HepG2) 108041987
chr12 65925613 65926967 ZNF274 GTRD no Liver (HepG2) 108041988
chr12 65925681 65927096 ZNF274 GTRD no Liver (HepG2) 108041989
chr12 65925685 65926956 ZNF274 GTRD no Liver (HepG2) 108041990
chr12 65925691 65927091 ZNF274 GTRD no Liver (HepG2) 108041991
chr12 65925775 65927101 ZNF274 GTRD no Liver (HepG2) 108041992
chr12 65925973 65927120 ZNF274 GTRD no Liver (HepG2) 108041993
chr12 65925976 65926929 ZNF274 GTRD no Liver (HepG2) 108041994
chr12 65925982 65926979 ZNF274 GTRD no Liver (HepG2) 108041995
chr12 65925998 65927455 ZNF274 GTRD no Liver (HepG2) 108041996
chr12 65926503 65927099 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21553014
chr12 65926503 65927099 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041998
chr12 65926503 65927887 TCF7L2 UCSC Txn Factor no Conserved 108041999
chr12 65926519 65926971 SOX2 GTRD no Neural Stem Cells (H9) 108042000
chr12 65926570 65927206 ZNF274 GTRD no Liver (HepG2) 108042001
chr12 65926589 65927293 ZNF274 GTRD no Blood (GM12878) 108042002
chr12 65926600 65927103 ZNF274 GTRD no Liver (HepG2) 108042003
chr12 65926619 65927411 ZNF274 GTRD no Blood (GM12878) 108042004
chr12 65926908 65926929 IRF1 JASPAR yes 82423350
chr12 65926908 65926929 IRF1 JASPAR yes 121467858
chr12 65926909 65926930 IRF1 JASPAR yes 82423351
chr12 65926909 65926930 IRF1 JASPAR yes 121467859
chr12 65926911 65926926 FOXP1 JASPAR yes 82423352
chr12 65926911 65926926 FOXP1 JASPAR yes 121467860
chr12 65926912 65926927 FOXP1 JASPAR yes 82423353
chr12 65926912 65926927 FOXP1 JASPAR yes 121467861
chr12 65926913 65926928 FOXP1 JASPAR yes 82423354
chr12 65926913 65926928 FOXP1 JASPAR yes 121467862
chr12 65926913 65926934 IRF1 JASPAR yes 82423355
chr12 65926913 65926934 IRF1 JASPAR yes 121467863
chr12 65926914 65926929 FOXP1 JASPAR yes 82423356
chr12 65926914 65926929 FOXP1 JASPAR yes 121467864
chr12 65926914 65926935 IRF1 JASPAR yes 82423357
chr12 65926914 65926935 IRF1 JASPAR yes 121467865
chr12 65926915 65926930 FOXP1 JASPAR yes 82423358
chr12 65926915 65926930 FOXP1 JASPAR yes 121467866
chr12 65926915 65926936 IRF1 JASPAR yes 82423359
chr12 65926915 65926936 IRF1 JASPAR yes 121467867
chr12 65926916 65926931 FOXP1 JASPAR yes 82423360
chr12 65926916 65926931 FOXP1 JASPAR yes 121467868
Genes associated with rs556060271[chr12:65926925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More