EnhancerDB
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  3. rs556080294[chr1:202019793]
Enhancers that have rs556080294[chr1:202019793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs556080294[chr1:202019793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202014863 202020026 ZBTB33 GTRD no Lung (A549) 107857539
chr1 202016939 202020131 ZNF143 GTRD no Epithelial (MCF-7) 21365823
chr1 202016998 202019835 ZNF143 GTRD no Epithelial (MCF-7) 21365824
chr1 202017009 202020324 ZNF143 GTRD no Epithelial (MCF-7) 21365825
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365826
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365827
chr1 202017151 202020275 ZNF143 GTRD no Epithelial (MCF-7) 21365830
chr1 202017157 202019958 ZNF143 GTRD no Epithelial (MCF-7) 21365831
chr1 202017169 202020675 ZNF143 GTRD no Epithelial (MCF-7) 21365833
chr1 202017198 202019882 ZNF143 GTRD no Epithelial (MCF-7) 21365835
chr1 202017242 202019887 ZNF143 GTRD no Epithelial (MCF-7) 21365836
chr1 202017246 202019813 ZNF143 GTRD no Epithelial (MCF-7) 21365839
chr1 202017249 202019927 ZNF143 GTRD no Epithelial (MCF-7) 21365840
chr1 202017270 202020252 ZNF143 GTRD no Epithelial (MCF-7) 21365843
chr1 202017276 202019869 ZNF143 GTRD no Epithelial (MCF-7) 21365844
chr1 202017419 202020296 TCF7L2 GTRD no Colon (HCT116) 21365851
chr1 202017478 202019848 ZNF143 GTRD no Epithelial (MCF-7) 21365857
chr1 202017502 202020107 ZNF274 GTRD no Cervix (HeLa-S3) 21365859
chr1 202017656 202020495 ZNF274 GTRD no Cervix (HeLa-S3) 21365865
chr1 202019537 202020036 ZNF143 GTRD no Epithelial (MCF-7) 21365954
chr1 202019606 202020104 TCF7L2 GTRD no Colon (HCT116) 21365955
chr1 202019779 202019794 MEF2C JASPAR yes 34546827
chr1 202019780 202019795 MEF2A JASPAR yes 34546828
chr1 202019781 202019793 MEF2A JASPAR yes 34546829
chr1 202019781 202019793 MEF2B JASPAR yes 34546830
chr1 202019781 202019793 MEF2D JASPAR yes 34546831
chr1 202019786 202019797 CDX2 JASPAR yes 34546833
chr1 202019786 202019801 FOXP1 JASPAR yes 34546834
chr1 202019787 202019798 HOXA10 JASPAR yes 34546835
chr1 202019788 202019797 CDX1 JASPAR yes 34546836
chr1 202019788 202019798 HOXA13 JASPAR yes 34546837
chr1 202019788 202019798 HOXB13 JASPAR yes 34546838
chr1 202019788 202019798 HOXD13 JASPAR yes 34546839
chr1 202019792 202019798 TBP TRANSFAC yes 34546840
chr1 202019792 202019803 PROP1 JASPAR yes 34546841
Genes associated with rs556080294[chr1:202019793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More