EnhancerDB
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  3. rs556136880[chr1:16448024]
Enhancers that have rs556136880[chr1:16448024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs556136880[chr1:16448024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16448009 16448030 IRF1 JASPAR yes 27027237
chr1 16448010 16448025 FOXP1 JASPAR yes 27027239
chr1 16448011 16448026 FOXP1 JASPAR yes 27027240
chr1 16448012 16448027 FOXP1 JASPAR yes 27027241
chr1 16448013 16448028 FOXP1 JASPAR yes 27027242
chr1 16448014 16448029 FOXP1 JASPAR yes 27027243
chr1 16448015 16448030 FOXP1 JASPAR yes 27027244
chr1 16448015 16448030 MEF2C JASPAR yes 27027245
chr1 16448017 16448032 FOXP1 JASPAR yes 27027246
chr1 16448022 16448034 MEF2D JASPAR yes 27027247
chr1 16448024 16448028 YY1 TRANSFAC yes 27027248
Genes associated with rs556136880[chr1:16448024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More