EnhancerDB
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  3. rs556143660[chr16:11208339]
Enhancers that have rs556143660[chr16:11208339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556143660[chr16:11208339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11208327 11208340 SMAD2 JASPAR yes 9488754
chr16 11208335 11208345 TEAD1 JASPAR yes 9488755
chr16 11208335 11208345 TEAD4 JASPAR yes 9488756
Genes associated with rs556143660[chr16:11208339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More