EnhancerDB
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  3. rs556174371[chr16:1772608]
Enhancers that have rs556174371[chr16:1772608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556174371[chr16:1772608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1772590 1772608 ESR1 JASPAR yes 9158874
chr16 1772606 1772610 TEAD2 TRANSFAC yes 9158875
chr16 1772607 1772615 RHOXF1 JASPAR yes 9158876
Genes associated with rs556174371[chr16:1772608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More