EnhancerDB
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  3. rs556190082[chr6:13383909]
Enhancers that have rs556190082[chr6:13383909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs556190082[chr6:13383909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13383794 13384230 RELA UCSC Txn Factor no Conserved 108538593
chr6 13383814 13384244 CTCF UCSC Txn Factor no Conserved 108538594
chr6 13383904 13383922 MAFF JASPAR yes 70315557
chr6 13383904 13383922 MAFF JASPAR yes 100023465
chr6 13383905 13383920 MAFK JASPAR yes 70315558
chr6 13383905 13383920 MAFK JASPAR yes 100023466
chr6 13383906 13383918 FOXC2 JASPAR yes 70315559
chr6 13383906 13383918 FOXC2 JASPAR yes 100023467
chr6 13383906 13384193 RAD21 UCSC Txn Factor no Conserved 108538595
chr6 13383909 13383920 NRL JASPAR yes 70315560
chr6 13383909 13383920 NRL JASPAR yes 100023468
Genes associated with rs556190082[chr6:13383909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More