EnhancerDB
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  3. rs556260435[chr1:23943131]
Enhancers that have rs556260435[chr1:23943131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556260435[chr1:23943131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23943123 23943138 NFYB JASPAR yes 27448223
chr1 23943125 23943138 DUXA JASPAR yes 27448224
chr1 23943125 23943141 NFYA JASPAR yes 27448225
chr1 23943126 23943137 DUX4 JASPAR yes 27448226
chr1 23943126 23943144 NFYA JASPAR yes 27448227
chr1 23943130 23943134 H1TF2 TRANSFAC yes 27448228
chr1 23943130 23943134 NFE TRANSFAC yes 27448229
chr1 23943130 23943134 SRF TRANSFAC yes 27448230
Genes associated with rs556260435[chr1:23943131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More