EnhancerDB
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  3. rs556292067[chr1:25360207]
Enhancers that have rs556292067[chr1:25360207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
chr1 25360165 25361177 vista825
VISTA
Transcript factors that have rs556292067[chr1:25360207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802494
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802495
chr1 25360201 25360215 PLAG1 JASPAR yes 27556247
chr1 25360201 25360215 PLAG1 JASPAR yes 118253130
chr1 25360203 25360213 SP1 JASPAR yes 27556248
chr1 25360203 25360213 SP1 JASPAR yes 118253131
Genes associated with rs556292067[chr1:25360207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More