EnhancerDB
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  3. rs556299196[chr1:116492938]
Enhancers that have rs556299196[chr1:116492938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116486861 116498070 enh67111
Prostate (PC-3) Prostate (RWPE1) Stomach Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs556299196[chr1:116492938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116488832 116492994 ZNF143 GTRD no Epithelial (MCF-7) 21331448
chr1 116491717 116493325 ZNF143 GTRD no Epithelial (MCF-7) 21331465
chr1 116491757 116493423 ZNF143 GTRD no Epithelial (MCF-7) 21331466
chr1 116491789 116492952 ZNF143 GTRD no Epithelial (MCF-7) 21331467
chr1 116491798 116492951 ZNF143 GTRD no Epithelial (MCF-7) 21331468
chr1 116492109 116492985 ZNF143 GTRD no Epithelial (MCF-7) 21331472
chr1 116492617 116495219 ZNF143 GTRD no Epithelial (MCF-7) 21331478
chr1 116492934 116492950 POU4F3 JASPAR yes 31769353
chr1 116492936 116492950 POU4F1 JASPAR yes 31769354
Genes associated with rs556299196[chr1:116492938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More