EnhancerDB
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  3. rs556328289[chr16:29309142]
Enhancers that have rs556328289[chr16:29309142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs556328289[chr16:29309142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29307392 29309355 ZNF274 GTRD no Liver (HepG2) 21702230
chr16 29307567 29309476 ZNF274 GTRD no Liver (HepG2) 21702243
chr16 29308549 29309558 ZNF143 GTRD no Epithelial (MCF-7) 21702278
chr16 29308555 29309225 ZNF274 GTRD no Bone Marrow (K562) 21702279
chr16 29308602 29309592 ZNF143 GTRD no Epithelial (MCF-7) 21702280
chr16 29308604 29309552 ZNF143 GTRD no Epithelial (MCF-7) 21702281
chr16 29309000 29309476 ZNF143 GTRD no Epithelial (MCF-7) 21702282
chr16 29309123 29309143 RREB1 JASPAR yes 10258999
chr16 29309123 29309144 ZNF263 JASPAR yes 10259000
chr16 29309126 29309142 ZNF143 JASPAR yes 10259002
chr16 29309126 29309146 RREB1 JASPAR yes 10259003
chr16 29309127 29309148 ZNF263 JASPAR yes 10259004
chr16 29309130 29309150 RREB1 JASPAR yes 10259005
chr16 29309134 29309154 RREB1 JASPAR yes 10259007
chr16 29309138 29309143 SP1 TRANSFAC yes 10259008
chr16 29309142 29309147 SP1 TRANSFAC yes 10259009
Genes associated with rs556328289[chr16:29309142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More