EnhancerDB
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  3. rs556328449[chr2:238791481]
Enhancers that have rs556328449[chr2:238791481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556328449[chr2:238791481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238791471 238791486 TP53 JASPAR yes 82142004
chr2 238791475 238791484 THAP1 JASPAR yes 82142006
chr2 238791478 238791482 LFA1 TRANSFAC yes 82142007
chr2 238791478 238791490 PKNOX2 JASPAR yes 82142008
chr2 238791479 238791488 SNAI2 JASPAR yes 82142009
Genes associated with rs556328449[chr2:238791481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More