EnhancerDB
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  3. rs556381142[chr17:39834009]
Enhancers that have rs556381142[chr17:39834009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs556381142[chr17:39834009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39834001 39835444 POLR2A UCSC Txn Factor no Conserved 108259514
chr17 39834003 39834009 GATA3 JASPAR yes 54272318
chr17 39834007 39834013 GATA3 JASPAR yes 54272319
Genes associated with rs556381142[chr17:39834009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More