EnhancerDB
  1. Home
  2. SNP
  3. rs556391100[chr16:88273490]
Enhancers that have rs556391100[chr16:88273490]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs556391100[chr16:88273490]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88273482 88273497 SOX21 JASPAR yes 12269729
chr16 88273483 88273491 NKX6-1 JASPAR yes 12269730
Genes associated with rs556391100[chr16:88273490], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More