EnhancerDB
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  3. rs556396856[chr19:5028234]
Enhancers that have rs556396856[chr19:5028234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5019125 5039375 enh4975
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs556396856[chr19:5028234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5028225 5028246 ZNF263 JASPAR yes 112207238
chr19 5028227 5028238 E2F4 JASPAR yes 112207240
chr19 5028227 5028238 E2F6 JASPAR yes 112207241
chr19 5028228 5028239 E2F1 JASPAR yes 112207242
chr19 5028231 5028245 PLAG1 JASPAR yes 112207243
Genes associated with rs556396856[chr19:5028234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More