EnhancerDB
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  3. rs556399407[chr17:30846487]
Enhancers that have rs556399407[chr17:30846487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 30840656 30854616 enh17103
Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr17 30846365 30846870 vista24436
VISTA
Transcript factors that have rs556399407[chr17:30846487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 30846284 30846660 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108250167
chr17 30846331 30846821 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250168
chr17 30846339 30846775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750549
chr17 30846339 30846775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250169
chr17 30846361 30846671 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250170
chr17 30846383 30847903 POLR2A UCSC Txn Factor no Conserved 108250171
chr17 30846383 30847903 POLR2A UCSC Txn Factor no Conserved 108250172
chr17 30846396 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750550
chr17 30846396 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250173
chr17 30846422 30846608 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750551
chr17 30846422 30846608 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250174
chr17 30846441 30846557 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250175
chr17 30846444 30846708 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750552
chr17 30846444 30846708 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250176
chr17 30846452 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750553
chr17 30846452 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250177
chr17 30846483 30846613 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250178
Genes associated with rs556399407[chr17:30846487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More