EnhancerDB
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  3. rs556408493[chr17:78842893]
Enhancers that have rs556408493[chr17:78842893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs556408493[chr17:78842893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78842689 78844166 ZBTB33 GTRD no Lung (A549) 108307924
chr17 78842716 78844149 ZBTB33 GTRD no Lung (A549) 108307925
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307926
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307927
chr17 78842781 78843905 ZNF274 GTRD no Bone Marrow (K562) 108307928
chr17 78842834 78844080 ZNF274 GTRD no Cervix (HeLa-S3) 108307929
chr17 78842860 78844060 ZNF143 GTRD no Epithelial (MCF-7) 21797440
chr17 78842860 78844060 ZNF143 GTRD no Epithelial (MCF-7) 108307930
chr17 78842872 78844072 TCF7L2 GTRD no Colon (HCT116) 21797441
chr17 78842872 78844072 TCF7L2 GTRD no Colon (HCT116) 108307931
chr17 78842875 78843828 ZNF274 GTRD no Liver (HepG2) 108307932
chr17 78842879 78843778 ZNF274 GTRD no Blood (GM12878) 108307933
chr17 78842890 78843855 ZNF274 GTRD no Bone Marrow (K562) 108307934
chr17 78842891 78843798 ZBTB33 GTRD no Lung (A549) 108307935
Genes associated with rs556408493[chr17:78842893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More