EnhancerDB
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  3. rs55642214[chr16:85168560]
Enhancers that have rs55642214[chr16:85168560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55642214[chr16:85168560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85165833 85168881 ZNF274 GTRD no Liver (HepG2) 21720048
chr16 85166478 85168856 ZNF274 GTRD no Liver (HepG2) 21720053
chr16 85166497 85169073 ZNF274 GTRD no Liver (HepG2) 21720054
chr16 85166539 85169083 ZNF274 GTRD no Liver (HepG2) 21720060
chr16 85166540 85168983 ZNF274 GTRD no Liver (HepG2) 21720061
chr16 85166541 85169070 ZNF274 GTRD no Liver (HepG2) 21720062
chr16 85166566 85168561 ZNF274 GTRD no Liver (HepG2) 21720063
chr16 85166576 85169179 ZNF274 GTRD no Liver (HepG2) 21720065
chr16 85166589 85168841 ZNF274 GTRD no Liver (HepG2) 21720067
chr16 85166599 85168594 ZNF274 GTRD no Liver (HepG2) 21720069
chr16 85166824 85168602 ZNF274 GTRD no Liver (HepG2) 21720077
chr16 85166853 85168688 ZNF274 GTRD no Liver (HepG2) 21720079
chr16 85166862 85168684 ZNF274 GTRD no Liver (HepG2) 21720082
chr16 85166934 85169024 ZNF274 GTRD no Liver (HepG2) 21720086
chr16 85166936 85169026 ZNF274 GTRD no Liver (HepG2) 21720087
chr16 85166989 85169165 ZNF274 GTRD no Liver (HepG2) 21720091
chr16 85167021 85168617 ZNF274 GTRD no Liver (HepG2) 21720095
chr16 85167034 85168582 ZNF274 GTRD no Liver (HepG2) 21720096
chr16 85167368 85168719 ZNF143 GTRD no Epithelial (MCF-7) 21720102
chr16 85167369 85169050 ZNF143 GTRD no Epithelial (MCF-7) 21720103
chr16 85167735 85169084 ZNF274 GTRD no Cervix (HeLa-S3) 21720114
chr16 85167819 85169078 ZNF143 GTRD no Epithelial (MCF-7) 21720116
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 21720117
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 108213348
chr16 85167907 85172163 TCF7L2 GTRD no Colon (HCT116) 108213349
chr16 85168302 85173255 TCF7L2 GTRD no Colon (HCT116) 108213350
chr16 85168376 85170898 ZNF274 GTRD no Bone Marrow (K562) 108213351
chr16 85168376 85171973 TCF7L2 GTRD no Colon (HCT116) 108213352
chr16 85168388 85170788 TCF7L2 GTRD no Colon (HCT116) 108213353
chr16 85168428 85172197 TCF7L2 GTRD no Colon (HCT116) 108213354
chr16 85168442 85172303 TCF7L2 GTRD no Colon (HCT116) 108213355
chr16 85168454 85169128 ZNF143 GTRD no Epithelial (MCF-7) 21720120
chr16 85168469 85169065 ZNF143 GTRD no Epithelial (MCF-7) 21720121
chr16 85168471 85169025 ZNF274 GTRD no Liver (HepG2) 21720122
chr16 85168550 85168563 ZBTB18 JASPAR yes 12023314
chr16 85168552 85168562 MSC JASPAR yes 12023315
chr16 85168555 85169955 TCF7L2 GTRD no Colon (HCT116) 108213356
Genes associated with rs55642214[chr16:85168560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More