EnhancerDB
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  3. rs556429779[chr16:88274836]
Enhancers that have rs556429779[chr16:88274836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs556429779[chr16:88274836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88273658 88275261 TEF1 GTRD no Bone (Osteoblast) 21735591
chr16 88274701 88275379 ZBTB33 GTRD no Brain (SK-N-SH) 21735594
chr16 88274737 88275417 ZBTB33 GTRD no Brain (SK-N-SH) 21735595
chr16 88274765 88275336 ZBTB33 GTRD no Brain (SK-N-SH) 21735596
chr16 88274833 88274842 ZEB1 JASPAR yes 12269919
chr16 88274834 88274844 ID4 JASPAR yes 12269920
chr16 88274834 88274844 TCF3 JASPAR yes 12269921
chr16 88274834 88274844 TCF4 JASPAR yes 12269922
chr16 88274835 88274844 SNAI2 JASPAR yes 12269923
chr16 88274836 88274841 USF2 TRANSFAC yes 12269924
Genes associated with rs556429779[chr16:88274836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More