EnhancerDB
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  3. rs556461622[chr12:51219030]
Enhancers that have rs556461622[chr12:51219030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51216025 51222415 enh2350
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs556461622[chr12:51219030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51217649 51219231 ZNF274 GTRD no Liver (HepG2) 21545343
chr12 51217683 51219238 ZNF274 GTRD no Liver (HepG2) 21545344
chr12 51217721 51219247 ZNF143 GTRD no Epithelial (MCF-7) 21545346
chr12 51217739 51219875 ZNF274 GTRD no Liver (HepG2) 21545347
chr12 51217759 51219128 ZNF274 GTRD no Cervix (HeLa-S3) 21545350
chr12 51217790 51219221 ZNF143 GTRD no Epithelial (MCF-7) 21545354
chr12 51217806 51219745 ZNF274 GTRD no Liver (HepG2) 21545356
chr12 51217825 51219135 ZNF143 GTRD no Epithelial (MCF-7) 21545360
chr12 51217857 51219464 ZNF274 GTRD no Liver (HepG2) 21545366
chr12 51217866 51219270 ZNF274 GTRD no Cervix (HeLa-S3) 21545367
chr12 51217943 51219031 ZNF143 GTRD no Epithelial (MCF-7) 21545374
chr12 51217985 51219877 ZNF274 GTRD no Liver (HepG2) 21545377
chr12 51218007 51219055 ZNF143 GTRD no Epithelial (MCF-7) 21545380
chr12 51218456 51219185 ZNF274 GTRD no Liver (HepG2) 21545383
chr12 51218680 51219243 ZNF274 GTRD no Liver (HepG2) 21545385
chr12 51218698 51219797 ZNF274 GTRD no Liver (HepG2) 21545386
chr12 51218761 51219596 ZNF274 GTRD no Liver (HepG2) 21545387
chr12 51219015 51219030 IRF9 JASPAR yes 120864326
chr12 51219016 51219030 MTF1 JASPAR yes 120864327
chr12 51219021 51219034 EOMES JASPAR yes 120864328
chr12 51219023 51219033 TBR1 JASPAR yes 120864329
chr12 51219023 51219034 TBX20 JASPAR yes 120864330
chr12 51219023 51219034 TBX2 JASPAR yes 120864331
chr12 51219024 51219034 SREBF2 JASPAR yes 120864332
chr12 51219024 51219034 TBX21 JASPAR yes 120864333
chr12 51219025 51219033 MGA JASPAR yes 120864334
Genes associated with rs556461622[chr12:51219030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More