EnhancerDB
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  3. rs556490556[chr1:202042935]
Enhancers that have rs556490556[chr1:202042935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556490556[chr1:202042935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202042065 202043143 ZNF274 GTRD no Cervix (HeLa-S3) 21366443
chr1 202042150 202042974 ZNF143 GTRD no Epithelial (MCF-7) 21366444
chr1 202042308 202042973 ZNF143 GTRD no Epithelial (MCF-7) 21366446
chr1 202042345 202043076 ZNF143 GTRD no Epithelial (MCF-7) 21366447
chr1 202042924 202042938 JUN JASPAR yes 34549828
chr1 202042927 202042938 FOSL2 JASPAR yes 34549829
chr1 202042927 202042938 JUNB JASPAR yes 34549830
chr1 202042928 202042939 FOS JASPAR yes 34549831
chr1 202042928 202042939 FOSL1 JASPAR yes 34549832
chr1 202042928 202042939 JUND JASPAR yes 34549833
chr1 202042928 202042939 NFE2 JASPAR yes 34549834
chr1 202042929 202042936 JUN TRANSFAC yes 34549835
chr1 202042929 202042938 JDP2 JASPAR yes 34549836
chr1 202042929 202042940 FOSL2 JASPAR yes 34549837
chr1 202042929 202042940 JUNB JASPAR yes 34549838
chr1 202042929 202042943 JUN JASPAR yes 34549839
Genes associated with rs556490556[chr1:202042935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More