EnhancerDB
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  3. rs556505778[chr1:151962790]
Enhancers that have rs556505778[chr1:151962790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151957085 151964379 enh12261
Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Adrenal Muscle (Myoblast) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 151962641 151962839 vista3309
VISTA
Transcript factors that have rs556505778[chr1:151962790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151961557 151963800 POLR2A UCSC Txn Factor no Conserved 107830451
chr1 151961557 151963800 POLR2A UCSC Txn Factor no Conserved 107830452
chr1 151962501 151962971 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107830493
chr1 151962563 151963022 ZNF143 GTRD no Epithelial (MCF-7) 21338888
chr1 151962563 151963022 ZNF143 GTRD no Epithelial (MCF-7) 107830494
chr1 151962599 151962815 FOXA1 UCSC Txn Factor no Conserved 107830495
Genes associated with rs556505778[chr1:151962790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More