EnhancerDB
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  3. rs556509821[chr1:16224739]
Enhancers that have rs556509821[chr1:16224739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16216545 16234615 enh82
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Stomach
Transcript factors that have rs556509821[chr1:16224739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16224732 16224742 NKX2-3 JASPAR yes 27012653
chr1 16224733 16224741 ISL2 JASPAR yes 27012654
chr1 16224733 16224742 NKX3-2 JASPAR yes 27012655
Genes associated with rs556509821[chr1:16224739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More