EnhancerDB
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  3. rs556529040[chr1:40279112]
Enhancers that have rs556529040[chr1:40279112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs556529040[chr1:40279112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40278836 40279176 ZNF274 GTRD no Liver (HepG2) 21325344
chr1 40279106 40279117 FOXB1 JASPAR yes 28292105
chr1 40279110 40279118 FOXL1 JASPAR yes 28292106
chr1 40279110 40279121 FOXB1 JASPAR yes 28292107
chr1 40279111 40279122 FOXB1 JASPAR yes 28292108
chr1 40279112 40279120 FOXL1 JASPAR yes 28292109
chr1 40279112 40279123 FOXB1 JASPAR yes 28292110
Genes associated with rs556529040[chr1:40279112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More