EnhancerDB
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  3. rs556532339[chr1:52006359]
Enhancers that have rs556532339[chr1:52006359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs556532339[chr1:52006359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52006348 52006361 ZBTB18 JASPAR yes 28847743
chr1 52006350 52006360 ID4 JASPAR yes 28847744
chr1 52006350 52006360 TCF3 JASPAR yes 28847745
chr1 52006350 52006360 TCF4 JASPAR yes 28847746
chr1 52006352 52006361 ZEB1 JASPAR yes 28847747
chr1 52006353 52006361 TBX5 JASPAR yes 28847748
chr1 52006358 52006369 FOSL2 JASPAR yes 28847749
Genes associated with rs556532339[chr1:52006359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More