EnhancerDB
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  3. rs556537546[chr1:167235859]
Enhancers that have rs556537546[chr1:167235859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs556537546[chr1:167235859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167235848 167235864 SOX8 JASPAR yes 32855610
chr1 167235851 167235865 ONECUT1 JASPAR yes 32855611
chr1 167235851 167235865 ONECUT2 JASPAR yes 32855612
chr1 167235851 167235865 ONECUT3 JASPAR yes 32855613
chr1 167235853 167235874 IRF1 JASPAR yes 32855614
chr1 167235854 167235875 IRF1 JASPAR yes 32855615
chr1 167235856 167235877 IRF1 JASPAR yes 32855616
chr1 167235857 167235878 IRF1 JASPAR yes 32855617
chr1 167235858 167235873 FOXP1 JASPAR yes 32855618
chr1 167235858 167235879 IRF1 JASPAR yes 32855619
chr1 167235859 167235874 FOXP1 JASPAR yes 32855620
chr1 167235859 167235880 IRF1 JASPAR yes 32855621
Genes associated with rs556537546[chr1:167235859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More