EnhancerDB
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  3. rs556556899[chr2:216698993]
Enhancers that have rs556556899[chr2:216698993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556556899[chr2:216698993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216698981 216698995 SPI1 JASPAR yes 80811819
chr2 216698982 216699003 IRF1 JASPAR yes 80811820
chr2 216698984 216698999 PRDM1 JASPAR yes 80811822
chr2 216698986 216698998 IRF1 JASPAR yes 80811823
chr2 216698989 216699005 POU4F2 JASPAR yes 80811824
chr2 216698989 216699005 POU4F3 JASPAR yes 80811825
chr2 216698991 216698995 YY1 TRANSFAC yes 80811826
chr2 216698991 216699005 POU4F1 JASPAR yes 80811827
chr2 216698991 216699006 FOXP1 JASPAR yes 80811828
Genes associated with rs556556899[chr2:216698993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More