EnhancerDB
  1. Home
  2. SNP
  3. rs556610878[chr12:47609609]
Enhancers that have rs556610878[chr12:47609609]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs556610878[chr12:47609609]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47609597 47609611 PLAG1 JASPAR yes 120684629
chr12 47609604 47609609 SP1 TRANSFAC yes 120684630
chr12 47609605 47609610 SP1 TRANSFAC yes 120684631
chr12 47609608 47609621 NFKB1 JASPAR yes 120684632
Genes associated with rs556610878[chr12:47609609], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More