EnhancerDB
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  3. rs556624234[chr16:85496624]
Enhancers that have rs556624234[chr16:85496624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556624234[chr16:85496624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214729
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214730
chr16 85495694 85497110 TCF7L2 GTRD no Colon (HCT116) 108214731
chr16 85495752 85496986 ZNF274 GTRD no Bone Marrow (K562) 21726286
chr16 85495752 85496986 ZNF274 GTRD no Bone Marrow (K562) 108214732
chr16 85495836 85497111 TCF7L2 GTRD no Colon (HCT116) 108214733
chr16 85495852 85496980 ZNF143 GTRD no Epithelial (MCF-7) 21726287
chr16 85495852 85496980 ZNF143 GTRD no Epithelial (MCF-7) 108214734
chr16 85495966 85497042 ZNF143 GTRD no Epithelial (MCF-7) 21726289
chr16 85495966 85497042 ZNF143 GTRD no Epithelial (MCF-7) 108214735
chr16 85496029 85496955 TCF7L2 GTRD no Colon (HCT116) 108214736
chr16 85496130 85496781 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726309
chr16 85496301 85497025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726312
chr16 85496301 85497025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214737
chr16 85496608 85497118 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726313
chr16 85496608 85497118 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214738
chr16 85496621 85496630 TFAP2A JASPAR yes 12064573
Genes associated with rs556624234[chr16:85496624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More