EnhancerDB
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  3. rs55662727[chr8:125217225]
Enhancers that have rs55662727[chr8:125217225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 125201245 125218955 enh10508
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs55662727[chr8:125217225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 125217219 125217229 SREBF2 JASPAR yes 48094923
chr8 125217219 125217230 USF1 JASPAR yes 48094924
chr8 125217219 125217230 USF2 JASPAR yes 48094925
chr8 125217222 125217235 NFKB1 JASPAR yes 48094926
Genes associated with rs55662727[chr8:125217225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More