EnhancerDB
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  3. rs556652837[chr1:205449313]
Enhancers that have rs556652837[chr1:205449313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs556652837[chr1:205449313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205447094 205449923 ZNF274 GTRD no Bone Marrow (K562) 107862187
chr1 205447430 205451678 ZNF143 GTRD no Epithelial (MCF-7) 21371887
chr1 205447430 205451678 ZNF143 GTRD no Epithelial (MCF-7) 107862188
chr1 205447544 205451629 TCF7L2 GTRD no Colon (HCT116) 21371892
chr1 205447544 205451629 TCF7L2 GTRD no Colon (HCT116) 107862189
chr1 205447570 205451434 ZNF274 GTRD no Bone Marrow (K562) 107862190
chr1 205447713 205451244 ZNF274 GTRD no Liver (HepG2) 107862191
chr1 205447956 205451653 TCF7L2 GTRD no Colon (HCT116) 21371894
chr1 205447956 205451653 TCF7L2 GTRD no Colon (HCT116) 107862192
chr1 205448383 205451050 ZNF274 GTRD no Bone Marrow (K562) 107862193
chr1 205448493 205449428 ZNF143 GTRD no Epithelial (MCF-7) 21371899
chr1 205448523 205450562 ZNF143 GTRD no Epithelial (MCF-7) 21371900
chr1 205448523 205450562 ZNF143 GTRD no Epithelial (MCF-7) 107862194
chr1 205448543 205450817 ZNF274 GTRD no Bone Marrow (K562) 107862195
chr1 205448631 205450853 ZNF274 GTRD no Bone Marrow (K562) 107862196
chr1 205448647 205451190 ZNF274 GTRD no Liver (HepG2) 107862197
chr1 205448715 205450842 ZNF274 GTRD no Liver (HepG2) 107862198
chr1 205448857 205449390 ZNF143 GTRD no Epithelial (MCF-7) 21371902
chr1 205448869 205451775 TCF7L2 GTRD no Colon (HCT116) 21371903
chr1 205448869 205451775 TCF7L2 GTRD no Colon (HCT116) 107862199
chr1 205448887 205450122 ZNF143 GTRD no Epithelial (MCF-7) 21371904
chr1 205448887 205450122 ZNF143 GTRD no Epithelial (MCF-7) 107862200
chr1 205448904 205449802 ZNF143 GTRD no Epithelial (MCF-7) 21371905
chr1 205448935 205451202 ZNF143 GTRD no Epithelial (MCF-7) 21371906
chr1 205448935 205451202 ZNF143 GTRD no Epithelial (MCF-7) 107862201
chr1 205448972 205451539 ZNF274 GTRD no Liver (HepG2) 107862202
chr1 205449075 205450103 AR GTRD no Prostate (PC-3) 21371907
chr1 205449075 205450103 AR GTRD no Prostate (PC-3) 107862203
chr1 205449095 205450877 TCF7L2 GTRD no Colon (HCT116) 21371908
chr1 205449095 205450877 TCF7L2 GTRD no Colon (HCT116) 107862204
chr1 205449187 205450109 ZNF274 GTRD no Bone Marrow (K562) 107862205
chr1 205449246 205450900 ZNF274 GTRD no Bone Marrow (K562) 107862206
chr1 205449249 205450375 ZNF274 GTRD no Liver (HepG2) 107862207
chr1 205449281 205450836 ZNF274 GTRD no Bone Marrow (K562) 107862208
chr1 205449301 205449322 IRF1 JASPAR yes 34763222
chr1 205449301 205449948 ZNF274 GTRD no Liver (HepG2) 107862209
chr1 205449301 205450245 ZNF274 GTRD no Liver (HepG2) 107862210
chr1 205449302 205449323 IRF1 JASPAR yes 34763223
chr1 205449303 205449318 STAT2 JASPAR yes 34763224
chr1 205449306 205449321 FOXP1 JASPAR yes 34763225
chr1 205449307 205449322 FOXP1 JASPAR yes 34763226
chr1 205449308 205449323 FOXP1 JASPAR yes 34763227
chr1 205449309 205449324 FOXP1 JASPAR yes 34763228
chr1 205449310 205449325 FOXP1 JASPAR yes 34763229
chr1 205449311 205449326 FOXP1 JASPAR yes 34763230
Genes associated with rs556652837[chr1:205449313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More