EnhancerDB
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  3. rs556666285[chr17:70401980]
Enhancers that have rs556666285[chr17:70401980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556666285[chr17:70401980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70401976 70401983 SP1 TRANSFAC yes 55784084
chr17 70401977 70401982 SP1 TRANSFAC yes 55784085
chr17 70401977 70401983 SP1 TRANSFAC yes 55784086
chr17 70401977 70401984 SP1 TRANSFAC yes 55784087
chr17 70401978 70401990 INSM1 JASPAR yes 55784088
Genes associated with rs556666285[chr17:70401980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More