EnhancerDB
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  3. rs556677827[chr2:223710140]
Enhancers that have rs556677827[chr2:223710140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223687885 223715130 enh34305
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs556677827[chr2:223710140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223710133 223710146 ZBTB18 JASPAR yes 81219192
chr2 223710134 223710146 PKNOX1 JASPAR yes 81219193
chr2 223710134 223710146 TGIF1 JASPAR yes 81219194
chr2 223710135 223710144 SNAI2 JASPAR yes 81219195
chr2 223710135 223710145 FIGLA JASPAR yes 81219196
chr2 223710135 223710145 ID4 JASPAR yes 81219197
chr2 223710135 223710145 TCF3 JASPAR yes 81219198
chr2 223710135 223710145 TCF4 JASPAR yes 81219199
chr2 223710137 223710146 ZEB1 JASPAR yes 81219200
chr2 223710137 223710147 TBX21 JASPAR yes 81219201
chr2 223710138 223710146 MGA JASPAR yes 81219202
chr2 223710138 223710146 TBX15 JASPAR yes 81219203
chr2 223710138 223710146 TBX1 JASPAR yes 81219204
chr2 223710138 223710146 TBX4 JASPAR yes 81219205
chr2 223710138 223710146 TBX5 JASPAR yes 81219206
chr2 223710138 223710148 TBR1 JASPAR yes 81219207
chr2 223710138 223710151 SMAD2 JASPAR yes 81219208
Genes associated with rs556677827[chr2:223710140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More