EnhancerDB
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  3. rs556682590[chr12:46065353]
Enhancers that have rs556682590[chr12:46065353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46060843 46070795 enh29548
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Blood (T-cell) Stomach
Transcript factors that have rs556682590[chr12:46065353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46063649 46067863 ZNF274 GTRD no Blood (GM12878) 21540393
chr12 46065036 46066449 ZNF274 GTRD no Blood (GM12878) 21540422
chr12 46065049 46066362 ZNF274 GTRD no Blood (GM12878) 21540423
chr12 46065080 46066620 ZNF274 GTRD no Blood (GM12878) 21540424
chr12 46065083 46066389 ZNF274 GTRD no Blood (GM12878) 21540425
chr12 46065087 46066361 ZNF274 GTRD no Blood (GM12878) 21540426
chr12 46065095 46066426 ZNF274 GTRD no Blood (GM12878) 21540427
chr12 46065096 46065436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540428
chr12 46065109 46066541 ZNF274 GTRD no Blood (GM12878) 21540429
chr12 46065119 46066223 ZNF274 GTRD no Blood (GM12878) 21540430
chr12 46065139 46066344 ZNF274 GTRD no Blood (GM12878) 21540431
chr12 46065141 46065461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540432
chr12 46065142 46065472 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540433
chr12 46065143 46066288 ZNF274 GTRD no Blood (GM12878) 21540434
chr12 46065155 46066288 ZNF274 GTRD no Blood (GM12878) 21540435
chr12 46065167 46066529 ZNF274 GTRD no Blood (GM12878) 21540436
chr12 46065184 46066557 ZNF274 GTRD no Blood (GM12878) 21540437
chr12 46065261 46065766 ZNF274 GTRD no Blood (GM12878) 21540438
chr12 46065261 46066134 ZNF274 GTRD no Blood (GM12878) 21540439
chr12 46065270 46066148 ZNF274 GTRD no Blood (GM12878) 21540440
chr12 46065291 46066118 ZNF274 GTRD no Blood (GM12878) 21540441
chr12 46065299 46065639 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21540442
chr12 46065301 46066048 ZNF274 GTRD no Blood (GM12878) 21540443
chr12 46065322 46066164 ZNF274 GTRD no Blood (GM12878) 21540444
chr12 46065329 46065919 ZNF274 GTRD no Blood (GM12878) 21540445
chr12 46065337 46066255 ZNF274 GTRD no Blood (GM12878) 21540446
chr12 46065341 46065356 FOXP1 JASPAR yes 120572702
chr12 46065342 46065353 FOXA1 JASPAR yes 120572703
chr12 46065342 46065357 FOXA1 JASPAR yes 120572704
chr12 46065343 46065354 FOXB1 JASPAR yes 120572705
chr12 46065343 46065354 FOXC1 JASPAR yes 120572706
chr12 46065343 46065355 FOXC2 JASPAR yes 120572707
chr12 46065344 46065355 FOXP2 JASPAR yes 120572708
chr12 46065344 46065356 FOXI1 JASPAR yes 120572709
chr12 46065346 46065354 FOXG1 JASPAR yes 120572712
chr12 46065346 46065354 FOXO3 JASPAR yes 120572713
chr12 46065352 46066200 ZNF274 GTRD no Blood (GM12878) 21540447
Genes associated with rs556682590[chr12:46065353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More