EnhancerDB
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  3. rs556686792[chr1:16290695]
Enhancers that have rs556686792[chr1:16290695]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16272606 16295457 enh83
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs556686792[chr1:16290695]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16290678 16290696 IRF2 JASPAR yes 27018943
chr1 16290687 16290703 SOX4 JASPAR yes 27018944
chr1 16290688 16290697 VENTX JASPAR yes 27018945
chr1 16290688 16290698 GBX2 JASPAR yes 27018946
chr1 16290688 16290698 GSX2 JASPAR yes 27018947
chr1 16290688 16290698 HOXB3 JASPAR yes 27018948
chr1 16290688 16290698 MNX1 JASPAR yes 27018949
chr1 16290688 16290698 RAX JASPAR yes 27018950
chr1 16290688 16290699 HOXA10 JASPAR yes 27018951
chr1 16290688 16290703 SOX21 JASPAR yes 27018952
chr1 16290688 16290704 SOX4 JASPAR yes 27018953
chr1 16290689 16290697 BARX1 JASPAR yes 27018954
chr1 16290689 16290697 BSX JASPAR yes 27018955
chr1 16290689 16290697 ISL2 JASPAR yes 27018956
chr1 16290689 16290697 LMX1B JASPAR yes 27018957
chr1 16290689 16290697 MSX1 JASPAR yes 27018958
chr1 16290689 16290697 MSX2 JASPAR yes 27018959
Genes associated with rs556686792[chr1:16290695], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More