EnhancerDB
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  3. rs55671046[chr18:51784064]
Enhancers that have rs55671046[chr18:51784064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs55671046[chr18:51784064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51784049 51784065 POU4F2 JASPAR yes 110712667
chr18 51784049 51784065 POU4F3 JASPAR yes 110712668
chr18 51784054 51784064 PAX3 JASPAR yes 110712689
chr18 51784054 51784064 PAX7 JASPAR yes 110712690
chr18 51784054 51784065 PHOX2A JASPAR yes 110712691
chr18 51784054 51784065 PROP1 JASPAR yes 110712692
Genes associated with rs55671046[chr18:51784064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr18 51795774 51847636 + POLI ENSG00000101751.6 51795774 11710 Lung 4.81427e-47 16596