EnhancerDB
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  3. rs556739662[chr2:225382516]
Enhancers that have rs556739662[chr2:225382516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs556739662[chr2:225382516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225382504 225382517 HSF2 JASPAR yes 81336505
chr2 225382505 225382521 SOX8 JASPAR yes 81336506
chr2 225382508 225382523 HSF1 JASPAR yes 81336507
chr2 225382509 225382522 HSF1 JASPAR yes 81336508
chr2 225382509 225382522 HSF2 JASPAR yes 81336509
chr2 225382509 225382522 HSF4 JASPAR yes 81336510
chr2 225382509 225382530 IRF1 JASPAR yes 81336511
Genes associated with rs556739662[chr2:225382516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More