EnhancerDB
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  3. rs556784456[chr2:69054479]
Enhancers that have rs556784456[chr2:69054479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69053005 69068635 enh5634
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556784456[chr2:69054479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69054466 69054484 NFYA JASPAR yes 74800771
chr2 69054471 69054481 ALX3 JASPAR yes 74800772
chr2 69054471 69054481 GSX2 JASPAR yes 74800773
chr2 69054471 69054481 LBX2 JASPAR yes 74800774
chr2 69054471 69054481 MIXL1 JASPAR yes 74800775
chr2 69054472 69054480 BARX1 JASPAR yes 74800776
chr2 69054472 69054480 BSX JASPAR yes 74800777
chr2 69054472 69054480 EN1 JASPAR yes 74800778
chr2 69054472 69054480 ISX JASPAR yes 74800779
chr2 69054472 69054480 LHX9 JASPAR yes 74800780
chr2 69054472 69054480 MSX1 JASPAR yes 74800781
chr2 69054472 69054480 MSX2 JASPAR yes 74800782
chr2 69054472 69054480 PRRX1 JASPAR yes 74800783
chr2 69054472 69054480 RAX2 JASPAR yes 74800784
chr2 69054472 69054480 SHOX JASPAR yes 74800785
Genes associated with rs556784456[chr2:69054479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More