EnhancerDB
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  3. rs556790327[chr1:33417857]
Enhancers that have rs556790327[chr1:33417857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33412495 33428675 enh215
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
Transcript factors that have rs556790327[chr1:33417857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33417840 33417858 SRF JASPAR yes 28016417
chr1 33417846 33417859 POU3F3 JASPAR yes 28016418
chr1 33417846 33417860 POU1F1 JASPAR yes 28016419
chr1 33417851 33417861 HESX1 JASPAR yes 28016420
chr1 33417851 33417861 LBX2 JASPAR yes 28016421
chr1 33417851 33417861 RAX JASPAR yes 28016422
chr1 33417852 33417860 ISX JASPAR yes 28016423
chr1 33417852 33417860 LHX9 JASPAR yes 28016424
chr1 33417852 33417860 LMX1B JASPAR yes 28016425
chr1 33417852 33417860 PRRX1 JASPAR yes 28016426
chr1 33417852 33417860 RAX2 JASPAR yes 28016427
chr1 33417852 33417860 SHOX JASPAR yes 28016428
chr1 33417852 33417860 UNCX JASPAR yes 28016429
Genes associated with rs556790327[chr1:33417857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More