EnhancerDB
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  3. rs556806836[chr1:172795488]
Enhancers that have rs556806836[chr1:172795488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172784470 172799215 enh732
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs556806836[chr1:172795488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172795158 172795518 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21350329
chr1 172795255 172795625 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21350334
chr1 172795475 172795489 STAT1 JASPAR yes 33155049
chr1 172795475 172795490 STAT2 JASPAR yes 33155050
chr1 172795481 172795498 NR3C1 JASPAR yes 33155051
chr1 172795481 172795498 NR3C2 JASPAR yes 33155052
chr1 172795481 172795499 NR3C1 JASPAR yes 33155053
chr1 172795483 172795498 AR JASPAR yes 33155054
Genes associated with rs556806836[chr1:172795488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More