EnhancerDB
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  3. rs556809871[chr1:3471730]
Enhancers that have rs556809871[chr1:3471730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs556809871[chr1:3471730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3471715 3471735 RREB1 JASPAR yes 26295533
chr1 3471717 3471737 RREB1 JASPAR yes 26295535
chr1 3471719 3471739 RREB1 JASPAR yes 26295536
chr1 3471722 3471742 RREB1 JASPAR yes 26295537
chr1 3471723 3471743 RREB1 JASPAR yes 26295538
chr1 3471724 3471744 RREB1 JASPAR yes 26295539
chr1 3471726 3471746 RREB1 JASPAR yes 26295540
chr1 3471727 3471747 RREB1 JASPAR yes 26295541
Genes associated with rs556809871[chr1:3471730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More