EnhancerDB
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  3. rs556812499[chr19:14471938]
Enhancers that have rs556812499[chr19:14471938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556812499[chr19:14471938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 21853187
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391247
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391248
chr19 14471167 14473238 TCF7L2 GTRD no Colon (HCT116) 21853190
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 21853193
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391249
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391250
chr19 14471259 14473126 TCF7L2 GTRD no Colon (HCT116) 21853194
chr19 14471270 14473644 ZNF143 GTRD no Epithelial (MCF-7) 21853195
chr19 14471276 14471955 ZNF274 GTRD no Bone Marrow (K562) 21853196
chr19 14471286 14473799 TCF7L2 GTRD no Colon (HCT116) 21853197
chr19 14471286 14473799 TCF7L2 GTRD no Colon (HCT116) 108391251
chr19 14471326 14473767 ZNF274 GTRD no Bone Marrow (K562) 21853198
chr19 14471326 14473767 ZNF274 GTRD no Bone Marrow (K562) 108391252
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 21853199
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391253
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391254
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 21853200
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391255
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391256
chr19 14471427 14472003 TCF7L2 GTRD no Colon (HCT116) 21853201
chr19 14471458 14473057 ZNF274 GTRD no Bone Marrow (K562) 21853202
chr19 14471463 14472893 ZNF274 GTRD no Bone Marrow (K562) 21853203
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391257
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391258
chr19 14471544 14473271 ZNF143 GTRD no Epithelial (MCF-7) 21853205
chr19 14471676 14471986 ZNF274 GTRD no Bone Marrow (K562) 21853206
chr19 14471676 14472970 ZNF143 GTRD no Epithelial (MCF-7) 21853207
chr19 14471752 14473091 ZNF274 GTRD no Bone Marrow (K562) 21853208
chr19 14471794 14472860 ZNF274 GTRD no Bone Marrow (K562) 21853209
chr19 14471797 14473669 ZNF274 GTRD no Blood (GM12878) 108391259
chr19 14471805 14473048 ZNF274 GTRD no Bone Marrow (K562) 21853210
chr19 14471821 14472777 ZNF274 GTRD no Cervix (HeLa-S3) 21853211
chr19 14471823 14472769 ZNF274 GTRD no Bone Marrow (K562) 21853212
chr19 14471829 14472057 ZNF274 GTRD no Bone Marrow (K562) 21853213
chr19 14471831 14472773 ZNF274 GTRD no Bone Marrow (K562) 21853214
chr19 14471833 14473014 ZNF143 GTRD no Epithelial (MCF-7) 21853215
chr19 14471843 14472815 ZNF274 GTRD no Bone Marrow (K562) 21853216
chr19 14471848 14472644 ZNF274 GTRD no Cervix (HeLa-S3) 21853217
chr19 14471857 14472932 ZNF143 GTRD no Epithelial (MCF-7) 21853218
chr19 14471858 14472960 ZNF274 GTRD no Bone Marrow (K562) 21853219
chr19 14471863 14472765 ZNF274 GTRD no Cervix (HeLa-S3) 21853220
chr19 14471866 14472927 ZNF274 GTRD no Bone Marrow (K562) 21853221
chr19 14471867 14472866 ZNF274 GTRD no Bone Marrow (K562) 21853222
chr19 14471871 14472992 ZNF274 GTRD no Bone Marrow (K562) 21853223
chr19 14471887 14472819 TCF7L2 GTRD no Colon (HCT116) 21853224
chr19 14471920 14473043 TCF7L2 GTRD no Colon (HCT116) 21853225
chr19 14471926 14472704 ZNF143 GTRD no Epithelial (MCF-7) 21853226
chr19 14471927 14472926 ZNF274 GTRD no Bone Marrow (K562) 21853227
chr19 14471935 14472960 ZNF274 GTRD no Bone Marrow (K562) 21853228
chr19 14471936 14471947 TFAP2A JASPAR yes 112565544
Genes associated with rs556812499[chr19:14471938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More