EnhancerDB
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  3. rs55682958[chr1:23086975]
Enhancers that have rs55682958[chr1:23086975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs55682958[chr1:23086975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23086970 23086979 ZEB1 JASPAR yes 27389745
chr1 23086971 23086981 FIGLA JASPAR yes 27389746
chr1 23086971 23086981 TCF3 JASPAR yes 27389747
chr1 23086971 23086981 TCF4 JASPAR yes 27389748
chr1 23086972 23086981 SNAI2 JASPAR yes 27389749
chr1 23086973 23086978 USF2 TRANSFAC yes 27389750
Genes associated with rs55682958[chr1:23086975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More