EnhancerDB
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  3. rs55683207[chr17:70422904]
Enhancers that have rs55683207[chr17:70422904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55683207[chr17:70422904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 21785114
chr17 70421527 70422930 AR GTRD no Prostate (PC-3) 108290127
chr17 70422748 70423294 ZNF274 GTRD no Liver (HepG2) 21785124
chr17 70422748 70423294 ZNF274 GTRD no Liver (HepG2) 108290135
chr17 70422764 70423287 ZNF274 GTRD no Liver (HepG2) 21785125
chr17 70422764 70423287 ZNF274 GTRD no Liver (HepG2) 108290136
chr17 70422844 70423307 ZNF274 GTRD no Liver (HepG2) 21785126
chr17 70422844 70423307 ZNF274 GTRD no Liver (HepG2) 108290137
chr17 70422899 70422910 EBF1 JASPAR yes 55786923
chr17 70422900 70422915 TFAP2C JASPAR yes 55786924
Genes associated with rs55683207[chr17:70422904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More