EnhancerDB
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  3. rs556852623[chr1:3227446]
Enhancers that have rs556852623[chr1:3227446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556852623[chr1:3227446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3227426 3227446 TP53 JASPAR yes 26278057
chr1 3227428 3227448 TP63 JASPAR yes 26278058
chr1 3227429 3227447 TP53 JASPAR yes 26278059
chr1 3227429 3227447 TP63 JASPAR yes 26278060
chr1 3227429 3227447 TP73 JASPAR yes 26278061
chr1 3227430 3227450 TP53 JASPAR yes 26278063
chr1 3227431 3227446 TP53 JASPAR yes 26278064
chr1 3227437 3227448 NRF1 JASPAR yes 26278066
Genes associated with rs556852623[chr1:3227446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More